Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGCTTATTTTTATTTTGGGACCGAGCTGCC
..((((((.((((((((((((&)))))))...............))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001286184
GeneSymbolSLC25A44
Binding site1560,1594
Score0.923
Seed1
Au0.559
Energy-23.5
Binding len34
Me-6.013
Phylopstem0.40417867407407404
Phylopflank0.10137725000000003
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end8
Position3UTR
2D Structure