Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCACAACTTACAGCTGCAGCTGCAG
.((((((((((((((((((..&.)))))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001286189
GeneSymbolSCAF8
Binding site954,979
Score0.846
Seed1
Au0.485
Energy-33.9
Binding len20
Me-3.793
Phylopstem5.506693188888891
Phylopflank4.976766942499999
Longest consecutive pairings18
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure