Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGCGTGTGCCAGA
..(((((((((...((((....&))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001286191
GeneSymbolC12orf43
Binding site252,266
Score0.923
Seed1
Au0.485
Energy-18.5
Binding len14
Me-10.45
Phylopstem0.1478034933333333
Phylopflank-0.38074682949999994
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure