Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGGCTGCAGCTGGAC
.(.(((((((((((...(((.&)))))))))))))).).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001286210
GeneSymbolSTX6
Binding site909,926
Score0.846
Seed0
Au0.441
Energy-21.0
Binding len17
Me-6.319
Phylopstem0.4854589636363636
Phylopflank0.5572019400000001
Longest consecutive pairings14
Position of longest consecutive pairings3
Pairings in 3prime end4
Position3UTR
2D Structure