Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGGAACCATTGAGGATTGCAACCGCTGCCTCCAGGGTCCAGATGTGCTGCAGT
(((((((.((((((((((...&.))))))))))....................))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001286219
GeneSymbolTMEM132B
Binding site5147,5203
Score0.923
Seed1
Au0.441
Energy-22.4
Binding len39
Me-6.251
Phylopstem0.09429608000000003
Phylopflank-0.7516117574999999
Longest consecutive pairings10
Position of longest consecutive pairings28
Pairings in 3prime end5
Position3UTR
2D Structure