Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGCGCCTGGCTGCTGCTGCT
..(((((.(((((((((((((&))))))))....))))).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001364381
GeneSymbolMGAT1
Binding site5663,5687
Score0.846
Seed0
Au0.397
Energy-25.7
Binding len24
Me-7.271
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings16
Pairings in 3prime end8
Position3UTR
2D Structure