Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTTACGGCCTCTTCCAGGCCATTCCCCAGCTGCAC
.((((((((.(((((((((((&))))).)))))).................)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001364381
GeneSymbolMGAT1
Binding site5258,5296
Score0.846
Seed1
Au0.368
Energy-23.0
Binding len38
Me-5.036
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end8
Position3UTR
2D Structure