Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GTGAAAAAGGCTGCAAAAAGTAGGGCTG
((.((((((((((((..(((.&)))...))))))))).......))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_001286238
GeneSymbolSPATA6
Binding site3849,3877
Score0.846
Seed0
Au0.588
Energy-20.5
Binding len28
Me-5.728
Phylopstem1.833752568421053
Phylopflank1.73176623125
Longest consecutive pairings9
Position of longest consecutive pairings13
Pairings in 3prime end5
Position3UTR
2D Structure