Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGTAAACTGGGGCTGTC
..((((((.(((((...((((&))))...))))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001286238
GeneSymbolSPATA6
Binding site3265,3285
Score0.846
Seed1
Au0.588
Energy-22.1
Binding len20
Me-6.982
Phylopstem1.3286417333333331
Phylopflank0.9285466549999996
Longest consecutive pairings6
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure