Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGTGGATGAAGGCTTGATCCCTGGAGATGGGCTGGGTGCCGCAGGGCTCG
.((((((((((((((((((((&)))))..)))))))..........................)))))).)).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_001286242
GeneSymbolGTF3C1
Binding site3331,3381
Score0.846
Seed1
Au0.368
Energy-28.2
Binding len50
Me-3.793
Phylopstem2.1416055020408167
Phylopflank1.317002685
Longest consecutive pairings7
Position of longest consecutive pairings36
Pairings in 3prime end8
PositionCDS
2D Structure