Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGGGCCCGGAGCTGA
...(((((.(((.(.((((((&)))))).).))).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001286242
GeneSymbolGTF3C1
Binding site5709,5728
Score0.923
Seed0
Au0.353
Energy-22.8
Binding len19
Me-9.596
Phylopstem4.395028666666667
Phylopflank3.8361987662500003
Longest consecutive pairings6
Position of longest consecutive pairings13
Pairings in 3prime end7
PositionCDS
2D Structure