Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGCGCAGCAAGCAGTCCTCCCGGCACCGTCGGAAGCGCAGTTGCAGC
(((((((((((.((.(..(((&.)))...).)).))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001286244
GeneSymbolCCDC63
Binding site13,62
Score0.923
Seed1
Au0.309
Energy-23.3
Binding len24
Me-8.02
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end5
Position5UTR
2D Structure