Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGCAGGGCTGGCTGTGCTGGGTTC
.(((((.((((((..(((.((&))..)))..))))))...))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_001286258
GeneSymbolPKNOX1
Binding site4328,4352
Score0.846
Seed0
Au0.338
Energy-23.9
Binding len24
Me-6.929
Phylopstem0.18796933333333332
Phylopflank-0.09921800750000007
Longest consecutive pairings6
Position of longest consecutive pairings9
Pairings in 3prime end5
Position3UTR
2D Structure