Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AGAGTTACATGATATGACTCAAATTTTTAAAGGATCACTTTGGCTGCCAGGTG
((((((((..(((.((.(((((&.))))))).)))..)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001286272
GeneSymbolTPT1
Binding site3423,3476
Score0.846
Seed1
Au0.618
Energy-21.9
Binding len23
Me-7.093
Phylopstem2.6410951249999997
Phylopflank1.1983787675
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure