Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCAGAAAGAGTAAAACCTTTTATGACAGGGGCTGCAGA
((((((((.(.((((((((((&.))))..)))))).).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001286272
GeneSymbolTPT1
Binding site434,473
Score0.846
Seed1
Au0.603
Energy-22.4
Binding len25
Me-7.819
Phylopstem-0.2801807
Phylopflank-0.16182971600000004
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end8
PositionCDS
2D Structure