Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGCGCTTTCCGTCTGTCTAATTGTGGCAGCTGA
...(((((((((.(((((((.&)))))))))...................))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001286272
GeneSymbolTPT1
Binding site1812,1848
Score0.923
Seed0
Au0.559
Energy-18.9
Binding len36
Me-7.804
Phylopstem-0.302092167857143
Phylopflank-0.23086207875000003
Longest consecutive pairings9
Position of longest consecutive pairings27
Pairings in 3prime end7
Position3UTR
2D Structure