Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGCGCTTTCCGTCTGTCTAATTGTGGCAGCTGA
...(((((((((.(((((((.&)))))))))...................))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001286273
GeneSymbolTPT1
Binding site1573,1609
Score0.923
Seed0
Au0.559
Energy-18.9
Binding len36
Me-7.804
Phylopstem-0.4906175832142858
Phylopflank-0.38999376725
Longest consecutive pairings9
Position of longest consecutive pairings27
Pairings in 3prime end7
Position3UTR
2D Structure