Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GGGTTTGCAAAGGTGCCTTTTGCCAGGG
.((((((((((..(((((((((&)))))))))...))).....))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001286349
GeneSymbolKIRREL1
Binding site5141,5169
Score0.846
Seed1
Au0.544
Energy-18.6
Binding len28
Me-8.429
Phylopstem-0.42064804
Phylopflank-0.11048048999999997
Longest consecutive pairings9
Position of longest consecutive pairings19
Pairings in 3prime end8
Position3UTR
2D Structure