Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CTTTGCAGCCACGGGTGG
...((.(((.((((((((((.&)))))))))).))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001286360
GeneSymbolPPIL6
Binding site1629,1647
Score0.846
Seed0
Au0.441
Energy-20.9
Binding len18
Me-9.658
Phylopstem0.05915594
Phylopflank0.05758925999999999
Longest consecutive pairings10
Position of longest consecutive pairings8
Pairings in 3prime end7
Position3UTR
2D Structure