Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCTTTGAGGAGCACTTGCAGGGGCAGCTGCAGA
((((((((((..(((((((((&.)).)))))))..)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001286367
GeneSymbolNOP9
Binding site1141,1177
Score1.0
Seed1
Au0.412
Energy-26.4
Binding len24
Me-10.109
Phylopstem2.0131270999999993
Phylopflank1.547666203375
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end8
PositionCDS
2D Structure