Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCACAGATATCTCACCAAATCACTGCTGAACTGGAGCTGCAAG
((((((((.(((((....(((&.)))....))))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001286371
GeneSymbolVTA1
Binding site4569,4613
Score1.0
Seed1
Au0.529
Energy-22.7
Binding len23
Me-5.962
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure