Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTTTCCACAACTGCAGAGTTGTATGGCTTGCAAG
(((((((((((((((((((((&)))))..))))))))))...........)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001286371
GeneSymbolVTA1
Binding site2129,2164
Score1.0
Seed1
Au0.588
Energy-20.1
Binding len35
Me-3.938
Phylopstem-0.12307001176470586
Phylopflank0.09211332000000005
Longest consecutive pairings10
Position of longest consecutive pairings18
Pairings in 3prime end8
Position3UTR
2D Structure