Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GTATGCCAGA
..(((((((((...........&))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001286372
GeneSymbolVTA1
Binding site358,368
Score0.923
Seed1
Au0.618
Energy-16.7
Binding len10
Me-11.418
Phylopstem5.697545222222222
Phylopflank5.471463099999999
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end0
PositionCDS
2D Structure