Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTCAGAACTGGAGCTGCC
..((((((.(((((.(.(((.&))).).))))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001286373
GeneSymbolTOMM40L
Binding site1179,1198
Score0.846
Seed1
Au0.397
Energy-22.6
Binding len19
Me-6.749
Phylopstem0.34224404999999997
Phylopflank1.25862358125
Longest consecutive pairings6
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure