Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTGGGGAAGGAAGTGAGCATGGCCTCAGCTGCAGA
(((((((((.((((((.....&.)))))).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001286374
GeneSymbolTOMM40L
Binding site1620,1656
Score0.949
Seed1
Au0.397
Energy-21.8
Binding len18
Me-5.18
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure