Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGGAGCACCAGCTGCAGA
(((((((((..(((.(.((((&))))).)))..))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001286375
GeneSymbolITGAX
Binding site2650,2671
Score0.923
Seed1
Au0.353
Energy-22.8
Binding len21
Me-8.74
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure