Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCAGAAACAAGGGCAGCTGCGT
.(((((((((..((((..(((&)))....))))..))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001286375
GeneSymbolITGAX
Binding site2582,2605
Score0.846
Seed1
Au0.353
Energy-21.3
Binding len23
Me-9.965
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure