Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCCCGGGGGGGCGGCCGATCGGGCCGGG
..(((((((((((((((((((.&)))))))))))))..........)))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001330723
GeneSymbolSNX27
Binding site404,434
Score0.923
Seed1
Au0.206
Energy-29.1
Binding len30
Me-4.957
Phylopstem3.3790847896551726
Phylopflank4.2291507587499995
Longest consecutive pairings13
Position of longest consecutive pairings17
Pairings in 3prime end7
PositionCDS
2D Structure