Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTACCCAGACTTCTTTTGCAATTTGTCCCTGGGAAGAGGGGGTCTCCCAGTGC
((((((((((((((((((((((&))))))))))..........................)))))).....)))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001330723
GeneSymbolSNX27
Binding site5124,5178
Score0.846
Seed1
Au0.412
Energy-28.2
Binding len54
Me-3.938
Phylopstem0.15342904339622618
Phylopflank0.40368097374999995
Longest consecutive pairings10
Position of longest consecutive pairings44
Pairings in 3prime end8
Position3UTR
2D Structure