Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGCAACTCCAGGTGCCAGGG
.((((((((....(((((....&))))).......)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001286400
GeneSymbolC14orf180
Binding site2141,2162
Score0.846
Seed1
Au0.412
Energy-19.0
Binding len21
Me-12.497
Phylopstem-0.8160061875
Phylopflank-0.7366526887499998
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure