Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGTGGCGCTGTGGGAGTCC
.(((((((((((....(((((&))))).)))))))).))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_001286402
GeneSymbolCIITA
Binding site2811,2830
Score0.923
Seed1
Au0.353
Energy-23.3
Binding len19
Me-6.908
Phylopstem3.544534416666666
Phylopflank1.9450989462500003
Longest consecutive pairings8
Position of longest consecutive pairings5
Pairings in 3prime end5
PositionCDS
2D Structure