Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACATCCATCGCAGCTGCAAA
((((((((((((((((.....&)))...))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001286403
GeneSymbolCIITA
Binding site7262,7282
Score1.0
Seed1
Au0.485
Energy-23.4
Binding len20
Me-3.938
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure