Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GGCTGCAGCTGCC
..((((((((((((.......&)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001286407
GeneSymbolRPUSD2
Binding site1226,1239
Score0.923
Seed1
Au0.412
Energy-22.0
Binding len13
Me-5.925
Phylopstem1.8687120833333335
Phylopflank2.00758930875
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end1
PositionCDS
2D Structure