Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTACCTCAGGGGTGCTTATGTTTGCCAAGACAGCTGCAGT
(((((((((((((.(((((((&)))))))...................)))..).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001286407
GeneSymbolRPUSD2
Binding site679,722
Score0.846
Seed1
Au0.471
Energy-21.3
Binding len43
Me-4.794
Phylopstem0.808333975
Phylopflank0.8898718924999999
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure