Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTGGACCCAGATGCAGCTGCC
..(((((((((.(((...(((&.)))))).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001286416
GeneSymbolSUMO3
Binding site332,354
Score0.923
Seed1
Au0.382
Energy-19.7
Binding len18
Me-8.537
Phylopstem0.42432505555555555
Phylopflank0.22006251874999994
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure