Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCATAAAACAGTATTTTTTAGAAGTTGTGTTACAACTGTAGCA
.....(((((((((((((.(.&.).))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001286426
GeneSymbolRNGTT
Binding site2301,2346
Score1.0
Seed0
Au0.721
Energy-20.3
Binding len17
Me-13.666
Phylopstem1.0435153076923078
Phylopflank1.490731405
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure