Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CAGCCGCAGCAGAGCCCCAGGCTACACAAGGCGCCCTGCAAA
(((((((((((((((......&))))))))))..........................))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001286440
GeneSymbolNME4
Binding site188,230
Score0.923
Seed1
Au0.382
Energy-20.8
Binding len42
Me-4.171
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings32
Pairings in 3prime end2
Position5UTR
2D Structure