Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTACATGTATGGAGCTGCC
..((((((.((..(((.((((&)))))))....)).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001286441
GeneSymbolEXD1
Binding site1387,1408
Score0.846
Seed1
Au0.441
Energy-18.8
Binding len21
Me-10.649
Phylopstem1.3980528833333334
Phylopflank0.5344953925
Longest consecutive pairings7
Position of longest consecutive pairings14
Pairings in 3prime end7
PositionCDS
2D Structure