Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GTGGGCAGCGCAGGTGGTGAAGGGGCTTCAGGGA
...(((((.((((((((((((&.))))).))..))))).))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_001286451
GeneSymbolHDDC3
Binding site452,486
Score0.846
Seed0
Au0.426
Energy-26.7
Binding len23
Me-7.571
Phylopstem0.08336358666666667
Phylopflank-0.05258950875
Longest consecutive pairings5
Position of longest consecutive pairings17
Pairings in 3prime end8
PositionCDS
2D Structure