Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCGCGCGATGGGCTCTGAGGCGGCGCAGCTGCT
..((((((((.(((((.....&.))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001286451
GeneSymbolHDDC3
Binding site2,35
Score0.923
Seed1
Au0.281
Energy-21.8
Binding len15
Me-7.782
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end3
Position5UTR
2D Structure