Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCCGACTGGTGGGCTGCAT
.(((((((.((((((..((((&)))).))))))...))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001286451
GeneSymbolHDDC3
Binding site927,949
Score0.923
Seed1
Au0.471
Energy-21.2
Binding len22
Me-5.083
Phylopstem0.30940034285714285
Phylopflank0.087865345
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure