Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CAGCCCTGCAGCTAGCAAG
(((((((((((((((......&)))))..)))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001286457
GeneSymbolUSP7
Binding site3656,3675
Score0.923
Seed1
Au0.441
Energy-20.3
Binding len19
Me-4.171
Phylopstem5.890601666666666
Phylopflank5.0945897675000005
Longest consecutive pairings6
Position of longest consecutive pairings6
Pairings in 3prime end2
Position3UTR
2D Structure