Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTCCTGCCAAAAGTTCAGCCTCCATGAGAAACTGCAGCCGTAGTTGA
...((((((((((((((((((&.))))...........)))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001286458
GeneSymbolUSP7
Binding site230,279
Score0.846
Seed0
Au0.5
Energy-24.1
Binding len31
Me-6.515
Phylopstem-0.00033521379310349944
Phylopflank-0.2508562824999999
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end8
Position5UTR
2D Structure