Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCAGACAATTGCAGCATGA
...(((((((((((((..(((&)))..))))))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001286461
GeneSymbolN4BP2L1
Binding site222,242
Score1.0
Seed0
Au0.456
Energy-21.4
Binding len20
Me-6.515
Phylopstem0.13617464285714284
Phylopflank-0.10627208681249997
Longest consecutive pairings11
Position of longest consecutive pairings4
Pairings in 3prime end6
PositionCDS
2D Structure