Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCGCTACAGCAACAGCAGCAT
.(((.((((..((((((.(((&)))..))))))..)))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001286490
GeneSymbolFRMD5
Binding site2391,2413
Score0.923
Seed0
Au0.412
Energy-20.9
Binding len22
Me-11.98
Phylopstem2.068945
Phylopflank1.2118905399999997
Longest consecutive pairings6
Position of longest consecutive pairings11
Pairings in 3prime end7
Position3UTR
2D Structure