Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGTGGGGACTCAGGCTGGGTGCAGCCTCC
.((..(((((.((((((((((&))))))))........)).)))))..)).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_001286497
GeneSymbolPIF1
Binding site2007,2036
Score0.846
Seed0
Au0.397
Energy-23.8
Binding len29
Me-13.769
Phylopstem2.2285619944444446
Phylopflank1.4531708349999999
Longest consecutive pairings8
Position of longest consecutive pairings21
Pairings in 3prime end8
PositionCDS
2D Structure