Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGACAGGCCGCGGCTGTC
..((((((((((((((.(((.&))).)))).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001286503
GeneSymbolHSPH1
Binding site153,173
Score0.923
Seed1
Au0.353
Energy-26.3
Binding len20
Me-4.957
Phylopstem-0.6655553170666668
Phylopflank-0.41864970335
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
Position5UTR
2D Structure