Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACAATCGGAGTTGCAGC
((((((((.(((((((.....&))))))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001286503
GeneSymbolHSPH1
Binding site460,477
Score1.0
Seed1
Au0.647
Energy-21.4
Binding len17
Me-4.994
Phylopstem0.2427032805
Phylopflank-0.13043862125
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure