Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACAATCGGAGTTGCAGC
((((((((.(((((((.....&))))))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001286505
GeneSymbolHSPH1
Binding site438,455
Score0.923
Seed1
Au0.647
Energy-21.4
Binding len17
Me-4.994
Phylopstem-0.41864925
Phylopflank-0.10537703820000002
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure