Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTTTATAATTTCTAGCTGCT
..(((((((.(((((((((((&)))))))))))..))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001286505
GeneSymbolHSPH1
Binding site4471,4492
Score0.923
Seed1
Au0.721
Energy-21.1
Binding len21
Me-6.2
Phylopstem4.821912909090909
Phylopflank3.5501562125
Longest consecutive pairings11
Position of longest consecutive pairings10
Pairings in 3prime end8
Position3UTR
2D Structure